Re: calibrations on rcas

From: Christian Holm Christensen (cholm@hehi03.nbi.dk)
Date: Fri Mar 29 2002 - 13:37:54 EST

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    Hi Steve, 
    
    On Fri, 29 Mar 2002 12:02:35 -0600
    "Stephen J. Sanders" <ssanders@ku.edu> wrote
    concerning "Re: calibrations on rcas":
    > Hi Christian,
    >  From which node does this work?  I tried submitting from rcas0019,
    > but bsub is not defined.  Is brahms_cas a machine? If so, how do I get 
    > to it?
    > 
    
    You need to have the LSF software in your PATH, and some other
    environment variables must also be set.  Once that's done, you can use
    the LSF software from any CAS node. 
    
    If you use the setup from brahmlib, then everything is done for you,
    and there's no need to do additional stuff.  Your `~/.login' file
    should look like:  
    
      # Un comment if you want to use the `new' AFS tree 
      # setenv BRAHMS_NEW yes
      if ( -f /brahms/u/brahmlib/etc/brahms.login ) then 
         source /brahms/u/brahmlib/etc/brahms.login  
      endif
     
      # Un comment if you want to use your own software tree too. 
      # setenv MY_SOFTWARE yes 
      if ($?MY_SOFTWARE) then 
        sysname=`fs sysname | sed "s,.*'\(.*\).*',\1,"`
        if ( -d ${HOME}/${sysname}/bin ) then 
         setenv PATH ${HOME}/${sysname}/bin:${PATH}
        endif
        unset sysname
      fi
    
    Do not put additional stuff into the `~/.login file', except for say
    aliases, and the like.   The file
    `/brahms/u/brahmlib/etc/brahms.login' takes care of all the needed
    stuff for a BRAHMS workstatition at the CAS, CRS, and PII nodes. 
    
    Your `~/.cshrc' and `~/.tcshrc' should be completly empty (this is
    important). 
    
    I'd like to recommend everyone in BRAHMS to have the above in your
    `~/.login' file.  If you're using bash (as I am), your `~/.profile'
    file should look like: 
    
      # Uncomment if you want to use the `new' AFS tree
      # export BRAHMS_NEW=1
      if test -f /brahms/u/brahmlib/etc/brahms.profile ; then 
        . /brahms/u/brahmlib/etc/brahms.profile 
      fi
    
      # Uncomment if you want to use your own software tree 
      # export MY_SOFTWARE=1
      if test ! "x$MY_SOFTWARE" = "x" ; then 
        sysname=`fs sysname | sed "s,.*'\(.*\).*',\1,"`
        if test -d /brahms/u/cholm/${sysname}/bin ; then 
          export PATH=/brahms/u/cholm/${sysname}/bin:${PATH}
        fi
        unset sysname
      fi
    
    and `~/.bashrc' should be empty. 
    
    Yours, 
    
    Christian Holm Christensen -------------------------------------------
    Address: Sankt Hansgade 23, 1. th.           Phone:  (+45) 35 35 96 91 
             DK-2200 Copenhagen N                Cell:   (+45) 28 82 16 23
             Denmark                             Office: (+45) 353  25 305 
    Email:   cholm@nbi.dk                        Web:    www.nbi.dk/~cholm
    



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